Publications

BRAIN Lab Publications

Description

Yu Y, Xie Y, Thamm T, Gong E, Ouyang J, Huang C, Christensen S, Marks MP, Lansberg MG, Albers GW, Zaharchuk G. Use of Deep Learning to Predict Final Ischemic Stroke Lesions From Initial Magnetic Resonance Imaging. JAMA Netw Open. 2020 03 02; 3(3):e200772.

Description

Smeland OB, Shadrin A, Bahrami S, Broce I, Tesli M, Frei O, Wirgenes KV, O'Connell KS, Krull F, Bettella F, Steen NE, Sugrue L, Wang Y, Svenningsson P, Sharma M, Pihlstrøm L, Toft M, O'Donovan M, Djurovic S, Desikan R, Dale AM, Andreassen OA. Genome-wide Association Analysis of Parkinson's Disease and Schizophrenia Reveals Shared Genetic Architecture and Identifies Novel Risk Loci. Biol Psychiatry. 2021 02 01; 89(3):227-235.

Description

Callen AL, Chow DS, Chen YA, Richelle HR, Pao J, Bardis M, Weinberg BD, Hess CP, Sugrue LP. Predictive Value of Noncontrast Head CT with Negative Findings in the Emergency Department Setting. AJNR Am J Neuroradiol. 2020 02; 41(2):213-218.

Description

Bryan RN, Davatzikos C, Herskovits EH, Mohan S, Rudie JD, Rauschecker AM. Medical Image Analysis: Human and Machine. Acad Radiol. 2020 01; 27(1):76-81.

Description

Wang K, Shou Q, Ma SJ, Liebeskind D, Qiao XJ, Saver J, Salamon N, Kim H, Yu Y, Xie Y, Zaharchuk G, Scalzo F, Wang DJJ. Deep Learning Detection of Penumbral Tissue on Arterial Spin Labeling in Stroke. Stroke. 2020 02; 51(2):489-497.

Description

Rudie JD, Weiss DA, Saluja R, Rauschecker AM, Wang J, Sugrue L, Bakas S, Colby JB. Multi-Disease Segmentation of Gliomas and White Matter Hyperintensities in the BraTS Data Using a 3D Convolutional Neural Network. Front Comput Neurosci. 2019; 13:84.

Description

Bonham LW, Sirkis DW, Hess CP, Sugrue LP, Yokoyama JS. The Radiogenomics of Late-onset Alzheimer Disease. Top Magn Reson Imaging. 2019 Dec; 28(6):325-334.

Description

Piatkevich KD, Bensussen S, Tseng HA, Shroff SN, Lopez-Huerta VG, Park D, Jung EE, Shemesh OA, Straub C, Gritton HJ, Romano MF, Costa E, Sabatini BL, Fu Z, Boyden ES, Han X. Population imaging of neural activity in awake behaving mice. Nature. 2019 10; 574(7778):413-417.

Description

Hagler DJ, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, Sicat CS, Kuperman J, Bartsch H, Xue F, Heitzeg MM, Laird AR, Trinh TT, Gonzalez R, Tapert SF, Riedel MC, Squeglia LM, Hyde LW, Rosenberg MD, Earl EA, Howlett KD, Baker FC, Soules M, Diaz J, de Leon OR, Thompson WK, Neale MC, Herting M, Sowell ER, Alvarez RP, Hawes SW, Sanchez M, Bodurka J, Breslin FJ, Morris AS, Paulus MP, Simmons WK, Polimeni JR, van der Kouwe A, Nencka AS, Gray KM, Pierpaoli C, Matochik JA, Noronha A, Aklin WM, Conway K, Glantz M, Hoffman E, Little R, Lopez M, Pariyadath V, Weiss SR, Wolff-Hughes DL, DelCarmen-Wiggins R, Feldstein Ewing SW, Miranda-Dominguez O, Nagel BJ, Perrone AJ, Sturgeon DT, Goldstone A, Pfefferbaum A, Pohl KM, Prouty D, Uban K, Bookheimer SY, Dapretto M, Galvan A, Bagot K, Giedd J, Infante MA, Jacobus J, Patrick K, Shilling PD, Desikan R, Li Y, Sugrue L, Banich MT, Friedman N, Hewitt JK, Hopfer C, Sakai J, Tanabe J, Cottler LB, Nixon SJ, Chang L, Cloak C, Ernst T, Reeves G, Kennedy DN, Heeringa S, Peltier S, Schulenberg J, Sripada C, Zucker RA, Iacono WG, Luciana M, Calabro FJ, Clark DB, Lewis DA, Luna B, Schirda C, Brima T, Foxe JJ, Freedman EG, Mruzek DW, Mason MJ, Huber R, McGlade E, Prescot A, Renshaw PF, Yurgelun-Todd DA, Allgaier NA, Dumas JA, Ivanova M, Potter A, Florsheim P, Larson C, Lisdahl K, Charness ME, Fuemmeler B, Hettema JM, Maes HH, Steinberg J, Anokhin AP, Glaser P, Heath AC, Madden PA, Baskin-Sommers A, Constable RT, Grant SJ, Dowling GJ, Brown SA, Jernigan TL, Dale AM. Image processing and analysis methods for the Adolescent Brain Cognitive Development Study. Neuroimage. 2019 11 15; 202:116091.

Description

Duong MT, Rauschecker AM, Rudie JD, Chen PH, Cook TS, Bryan RN, Mohan S. Artificial intelligence for precision education in radiology. Br J Radiol. 2019 Nov; 92(1103):20190389.

Description

Duong MT, Rudie JD, Wang J, Xie L, Mohan S, Gee JC, Rauschecker AM. Convolutional Neural Network for Automated FLAIR Lesion Segmentation on Clinical Brain MR Imaging. AJNR Am J Neuroradiol. 2019 08; 40(8):1282-1290.

Description

Sugrue LP, Desikan RS. Precision neuroradiology: mapping the nodes and networks that link genes to behaviour. Br J Radiol. 2019 Sep; 92(1101):20190093.

Description

Sugrue LP, Desikan RS. What Are Polygenic Scores and Why Are They Important? JAMA. 2019 May 14; 321(18):1820-1821.

Description

Lebares CC, Guvva EV, Olaru M, Sugrue LP, Staffaroni AM, Delucchi KL, Kramer JH, Ascher NL, Harris HW. Efficacy of Mindfulness-Based Cognitive Training in Surgery: Additional Analysis of the Mindful Surgeon Pilot Randomized Clinical Trial. JAMA Netw Open. 2019 05 03; 2(5):e194108.

Description

Romano M, Bucklin M, Gritton H, Mehrotra D, Kessel R, Han X. A Teensy microcontroller-based interface for optical imaging camera control during behavioral experiments. J Neurosci Methods. 2019 05 15; 320:107-115.

Description

Iigaya K, Ahmadian Y, Sugrue LP, Corrado GS, Loewenstein Y, Newsome WT, Fusi S. Deviation from the matching law reflects an optimal strategy involving learning over multiple timescales. Nat Commun. 2019 04 01; 10(1):1466.

Description

Gritton HJ, Howe WM, Romano MF, DiFeliceantonio AG, Kramer MA, Saligrama V, Bucklin ME, Zemel D, Han X. Unique contributions of parvalbumin and cholinergic interneurons in organizing striatal networks during movement. Nat Neurosci. 2019 04; 22(4):586-597.

Description

Meng Y, Li M, Yu Y, Xu Y, Gao S, Feng F, Xu WH. Quantitative score of the vessel morphology in middle cerebral artery atherosclerosis. J Neurol Sci. 2019 Apr 15; 399:111-117.

Description

Tan CH, Bonham LW, Fan CC, Mormino EC, Sugrue LP, Broce IJ, Hess CP, Yokoyama JS, Rabinovici GD, Miller BL, Yaffe K, Schellenberg GD, Kauppi K, Holland D, McEvoy LK, Kukull WA, Tosun D, Weiner MW, Sperling RA, Bennett DA, Hyman BT, Andreassen OA, Dale AM, Desikan RS, Alzheimer’s Disease Neuroimaging Initiative. Polygenic hazard score, amyloid deposition and Alzheimer's neurodegeneration. Brain. 2019 02 01; 142(2):460-470.

Description

Rudie JD, Rauschecker AM, Bryan RN, Davatzikos C, Mohan S. Emerging Applications of Artificial Intelligence in Neuro-Oncology. Radiology. 2019 03; 290(3):607-618.

BRAIN Lab Publications

Description

Yu Y, Xie Y, Thamm T, Gong E, Ouyang J, Huang C, Christensen S, Marks MP, Lansberg MG, Albers GW, Zaharchuk G. Use of Deep Learning to Predict Final Ischemic Stroke Lesions From Initial Magnetic Resonance Imaging. JAMA Netw Open. 2020 03 02; 3(3):e200772.

Description

Smeland OB, Shadrin A, Bahrami S, Broce I, Tesli M, Frei O, Wirgenes KV, O'Connell KS, Krull F, Bettella F, Steen NE, Sugrue L, Wang Y, Svenningsson P, Sharma M, Pihlstrøm L, Toft M, O'Donovan M, Djurovic S, Desikan R, Dale AM, Andreassen OA. Genome-wide Association Analysis of Parkinson's Disease and Schizophrenia Reveals Shared Genetic Architecture and Identifies Novel Risk Loci. Biol Psychiatry. 2021 02 01; 89(3):227-235.

Description

Callen AL, Chow DS, Chen YA, Richelle HR, Pao J, Bardis M, Weinberg BD, Hess CP, Sugrue LP. Predictive Value of Noncontrast Head CT with Negative Findings in the Emergency Department Setting. AJNR Am J Neuroradiol. 2020 02; 41(2):213-218.

Description

Bryan RN, Davatzikos C, Herskovits EH, Mohan S, Rudie JD, Rauschecker AM. Medical Image Analysis: Human and Machine. Acad Radiol. 2020 01; 27(1):76-81.

Description

Wang K, Shou Q, Ma SJ, Liebeskind D, Qiao XJ, Saver J, Salamon N, Kim H, Yu Y, Xie Y, Zaharchuk G, Scalzo F, Wang DJJ. Deep Learning Detection of Penumbral Tissue on Arterial Spin Labeling in Stroke. Stroke. 2020 02; 51(2):489-497.

Description

Rudie JD, Weiss DA, Saluja R, Rauschecker AM, Wang J, Sugrue L, Bakas S, Colby JB. Multi-Disease Segmentation of Gliomas and White Matter Hyperintensities in the BraTS Data Using a 3D Convolutional Neural Network. Front Comput Neurosci. 2019; 13:84.

Description

Bonham LW, Sirkis DW, Hess CP, Sugrue LP, Yokoyama JS. The Radiogenomics of Late-onset Alzheimer Disease. Top Magn Reson Imaging. 2019 Dec; 28(6):325-334.

Description

Piatkevich KD, Bensussen S, Tseng HA, Shroff SN, Lopez-Huerta VG, Park D, Jung EE, Shemesh OA, Straub C, Gritton HJ, Romano MF, Costa E, Sabatini BL, Fu Z, Boyden ES, Han X. Population imaging of neural activity in awake behaving mice. Nature. 2019 10; 574(7778):413-417.

Description

Hagler DJ, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, Sicat CS, Kuperman J, Bartsch H, Xue F, Heitzeg MM, Laird AR, Trinh TT, Gonzalez R, Tapert SF, Riedel MC, Squeglia LM, Hyde LW, Rosenberg MD, Earl EA, Howlett KD, Baker FC, Soules M, Diaz J, de Leon OR, Thompson WK, Neale MC, Herting M, Sowell ER, Alvarez RP, Hawes SW, Sanchez M, Bodurka J, Breslin FJ, Morris AS, Paulus MP, Simmons WK, Polimeni JR, van der Kouwe A, Nencka AS, Gray KM, Pierpaoli C, Matochik JA, Noronha A, Aklin WM, Conway K, Glantz M, Hoffman E, Little R, Lopez M, Pariyadath V, Weiss SR, Wolff-Hughes DL, DelCarmen-Wiggins R, Feldstein Ewing SW, Miranda-Dominguez O, Nagel BJ, Perrone AJ, Sturgeon DT, Goldstone A, Pfefferbaum A, Pohl KM, Prouty D, Uban K, Bookheimer SY, Dapretto M, Galvan A, Bagot K, Giedd J, Infante MA, Jacobus J, Patrick K, Shilling PD, Desikan R, Li Y, Sugrue L, Banich MT, Friedman N, Hewitt JK, Hopfer C, Sakai J, Tanabe J, Cottler LB, Nixon SJ, Chang L, Cloak C, Ernst T, Reeves G, Kennedy DN, Heeringa S, Peltier S, Schulenberg J, Sripada C, Zucker RA, Iacono WG, Luciana M, Calabro FJ, Clark DB, Lewis DA, Luna B, Schirda C, Brima T, Foxe JJ, Freedman EG, Mruzek DW, Mason MJ, Huber R, McGlade E, Prescot A, Renshaw PF, Yurgelun-Todd DA, Allgaier NA, Dumas JA, Ivanova M, Potter A, Florsheim P, Larson C, Lisdahl K, Charness ME, Fuemmeler B, Hettema JM, Maes HH, Steinberg J, Anokhin AP, Glaser P, Heath AC, Madden PA, Baskin-Sommers A, Constable RT, Grant SJ, Dowling GJ, Brown SA, Jernigan TL, Dale AM. Image processing and analysis methods for the Adolescent Brain Cognitive Development Study. Neuroimage. 2019 11 15; 202:116091.

Description

Duong MT, Rauschecker AM, Rudie JD, Chen PH, Cook TS, Bryan RN, Mohan S. Artificial intelligence for precision education in radiology. Br J Radiol. 2019 Nov; 92(1103):20190389.

Description

Duong MT, Rudie JD, Wang J, Xie L, Mohan S, Gee JC, Rauschecker AM. Convolutional Neural Network for Automated FLAIR Lesion Segmentation on Clinical Brain MR Imaging. AJNR Am J Neuroradiol. 2019 08; 40(8):1282-1290.

Description

Sugrue LP, Desikan RS. Precision neuroradiology: mapping the nodes and networks that link genes to behaviour. Br J Radiol. 2019 Sep; 92(1101):20190093.

Description

Sugrue LP, Desikan RS. What Are Polygenic Scores and Why Are They Important? JAMA. 2019 May 14; 321(18):1820-1821.

Description

Lebares CC, Guvva EV, Olaru M, Sugrue LP, Staffaroni AM, Delucchi KL, Kramer JH, Ascher NL, Harris HW. Efficacy of Mindfulness-Based Cognitive Training in Surgery: Additional Analysis of the Mindful Surgeon Pilot Randomized Clinical Trial. JAMA Netw Open. 2019 05 03; 2(5):e194108.

Description

Romano M, Bucklin M, Gritton H, Mehrotra D, Kessel R, Han X. A Teensy microcontroller-based interface for optical imaging camera control during behavioral experiments. J Neurosci Methods. 2019 05 15; 320:107-115.

Description

Iigaya K, Ahmadian Y, Sugrue LP, Corrado GS, Loewenstein Y, Newsome WT, Fusi S. Deviation from the matching law reflects an optimal strategy involving learning over multiple timescales. Nat Commun. 2019 04 01; 10(1):1466.

Description

Gritton HJ, Howe WM, Romano MF, DiFeliceantonio AG, Kramer MA, Saligrama V, Bucklin ME, Zemel D, Han X. Unique contributions of parvalbumin and cholinergic interneurons in organizing striatal networks during movement. Nat Neurosci. 2019 04; 22(4):586-597.

Description

Meng Y, Li M, Yu Y, Xu Y, Gao S, Feng F, Xu WH. Quantitative score of the vessel morphology in middle cerebral artery atherosclerosis. J Neurol Sci. 2019 Apr 15; 399:111-117.

Description

Tan CH, Bonham LW, Fan CC, Mormino EC, Sugrue LP, Broce IJ, Hess CP, Yokoyama JS, Rabinovici GD, Miller BL, Yaffe K, Schellenberg GD, Kauppi K, Holland D, McEvoy LK, Kukull WA, Tosun D, Weiner MW, Sperling RA, Bennett DA, Hyman BT, Andreassen OA, Dale AM, Desikan RS, Alzheimer’s Disease Neuroimaging Initiative. Polygenic hazard score, amyloid deposition and Alzheimer's neurodegeneration. Brain. 2019 02 01; 142(2):460-470.

Description

Rudie JD, Rauschecker AM, Bryan RN, Davatzikos C, Mohan S. Emerging Applications of Artificial Intelligence in Neuro-Oncology. Radiology. 2019 03; 290(3):607-618.