Publications

Weinert DA, Rauschecker AM. Enhancing Large Language Models with Retrieval-Augmented Generation: A Radiology-Specific Approach. Radiol Artif Intell. 2025 May; 7(3):e240313.

Tejani AS, Rauschecker AM. One System to Rule Them All? Task- and Data-specific Considerations for Automated Data Extraction. Radiol Artif Intell. 2025 May; 7(3):e250175.

Poole S, Sisodia N, Koshal K, Henderson K, Wijangco J, Paredes D, Chen C, Rowles W, Akula A, Wuerfel J, Sharma V, UCSF Multiple Sclerosis and Neuroinflammation Center clinicians, Rauschecker AM, Henry RG, Bove R. Detecting New Lesions Using a Large Language Model: Applications in Real-World Multiple Sclerosis Datasets. Ann Neurol. 2025 Apr 25.

Starkweather CK, Sugrue LP, Nedelec P, Krystal AD, Knowlton RC, Chang EF. Rapid resolution of depression and epilepsy following resection of a septal region tumor: illustrative case. J Neurosurg Case Lessons. 2025 Apr 14; 9(15).

Jasodanand VH, Kowshik SS, Puducheri S, Romano MF, Xu L, Au R, Kolachalama VB. AI-driven fusion of neurological work-up for assessment of biological Alzheimer's disease. medRxiv. 2025 Mar 17.

Lee AM, Kist A, Alvarez J, Sellers KK, Khambhati AN, Sugrue LP, Reid LB, Kadlec K, Fan JM, Allawala AB, Racine CA, Norbu T, Astudillo D, Tremblay-McGaw AG, Becker N, Alhourani A, Starr PA, Chang EF, Krystal AD. Invasive Brain Mapping Identifies Personalized Therapeutic Neuromodulation Targets for Obsessive-Compulsive Disorder. medRxiv. 2025 Mar 17.

Haddadi Avval A, Banerjee S, Zielke J, Kann B, Mueller S, Rauschecker AM. Applications of Artificial Intelligence and Advanced Imaging in Pediatric Diffuse Midline Glioma. Neuro Oncol. 2025 Mar 03.

Rauschecker AM, Nedelec P, Pan S, Olaru M, Nillo RM, Palmer CE, Pecheva D, Dale AM, Jernigan TL, Sugrue LP. Neurocognitive and brain structure correlates of reading and television habits in early adolescence. Sci Rep. 2025 Feb 20; 15(1):6235.

Eghbali R, Nedelec P, Weiss D, Bhalerao R, Xie L, Rudie JD, Liu C, Sugrue LP, Rauschecker AM. Automated Lesion and Feature Extraction Pipeline for Brain MRIs with Interpretability. Neuroinformatics. 2025 Jan 09; 23(1):2.

Shah BR, Tanabe J, Jordan JE, Kern D, Harward SC, Feltrin FS, O'Suilliebhain P, Sharma VD, Maldjian JA, Boutet A, Mattay R, Sugrue LP, Narsinh K, Hetts S, Shah LM, Druzgal J, Lehman VT, Lee K, Khanpara S, Lad S, Kaufmann TJ. State of Practice on Transcranial MR-Guided Focused Ultrasound: A Report from the ASNR Standards and Guidelines Committee and ACR Commission on Neuroradiology Workgroup. AJNR Am J Neuroradiol. 2025 Jan 08; 46(1):2-10.

Zhou MH, Cha S. MYCN-amplified spinal ependymomas: a rare aggressive subtype. Illustrative cases. J Neurosurg Case Lessons. 2025 Jan 06; 9(1).

Slepneva N, Basich-Pease G, Reid L, Frank AC, Norbu T, Krystal AD, Sugrue LP, Motzkin JC, Larson PS, Starr PA, Morrison MA, Lee AM. Therapeutic DBS for OCD Suppresses the Default Mode Network. Hum Brain Mapp. 2024 Dec 15; 45(18):e70106.

Loughnan R, Ahern J, Boyle M, Jernigan TL, Hagler DJ, Iversen JR, Frei O, Smith DM, Andreassen O, Zaitlen N, Sugrue L, Thompson WK, Dale A, Schork AJ, Fan CC. Hemochromatosis neural archetype reveals iron disruption in motor circuits. Sci Adv. 2024 Nov 22; 10(47):eadp4431.

Geng H, Mo SS, Chen L, Ballapuram A, Tsang M, Lu M, Rauschecker AM, Wen KW, Devine WP, Solomon DA, Rubenstein JL. Identification of Genomic Biomarkers of Disease Progression and Survival in Primary CNS Lymphoma. Blood Adv. 2024 Nov 13.

Azad R, Aghdam EK, Rauland A, Jia Y, Avval AH, Bozorgpour A, Karimijafarbigloo S, Cohen JP, Adeli E, Merhof D. Medical Image Segmentation Review: The Success of U-Net. IEEE Trans Pattern Anal Mach Intell. 2024 12; 46(12):10076-10095.

Bonham L, Sirkis D, Pang A, Sugrue L, Santamaría-García H, Ibanez A, Miller B, Yokoyama J, Corley M. DNA methylation age from peripheral blood predicts progression to Alzheimer's disease, white matter disease burden, and cortical atrophy. Res Sq. 2024 Oct 28.

Sugrue LP, Lashof-Regas S, Wang DD. Lesioning the Brain-From Serendipity to Science. JAMA Neurol. 2024 Oct 01; 81(10):1096-1097.

Rauschecker AM. Standardizing qualitative assessments of developing myelination on brain MRI. Eur J Paediatr Neurol. 2024 Sep; 52:A1.

Fan JM, Woodworth K, Murphy KR, Hinkley L, Cohen JL, Yoshimura J, Choi I, Tremblay-McGaw AG, Mergenthaler J, Good CH, Pellionisz PA, Lee AM, Di Ianni T, Sugrue LP, Krystal AD. Thalamic transcranial ultrasound stimulation in treatment resistant depression. Brain Stimul. 2024 Sep-Oct; 17(5):1001-1004.

Slepneva N, Basich-Pease G, Reid L, Frank AC, Norbu T, Krystal AD, Sugrue LP, Motzkin JC, Larson PS, Starr PA, Morrison MA, Lee AM. Therapeutic DBS for OCD Suppresses the Default Mode Network. bioRxiv. 2024 Jul 24.