Publications

Chen JV, Chaudhari G, Hess CP, Glenn OA, Sugrue LP, Rauschecker AM, Li Y. Deep Learning to Predict Neonatal and Infant Brain Age from Myelination on Brain MRI Scans. Radiology. 2022 Jul 19; 211860.

Kline C, Stoller S, Byer L, Samuel D, Lupo JM, Morrison MA, Rauschecker AM, Nedelec P, Faig W, Dubal DB, Fullerton HJ, Mueller S. An Integrated Analysis of Clinical, Genomic, and Imaging Features Reveals Predictors of Neurocognitive Outcomes in a Longitudinal Cohort of Pediatric Cancer Survivors, Enriched with CNS Tumors (Rad ART Pro). Front Oncol. 2022; 12:874317.

Bhaumik D, Bhaumik SS, Thaker AA, Timpone VM, Bills CB, Patten L, Pattee J, Chow D, Sugrue LP, Callen AL. Ordering Characteristics Predictive of Noncontrast CT Head Positivity in the Emergency Department. Acad Radiol. 2023 03; 30(3):492-498.

Chaudhari GR, Liu T, Chen TL, Joseph GB, Vella M, Lee YJ, Vu TH, Seo Y, Rauschecker AM, McCulloch CE, Sohn JH. Application of a Domain-specific BERT for Detection of Speech Recognition Errors in Radiology Reports. Radiol Artif Intell. 2022 Jul; 4(4):e210185.

Narsinh KH, Hui F, Saloner D, Tu-Chan A, Sharon J, Rauschecker AM, Safoora F, Shah V, Meisel K, Amans MR. Diagnostic Approach to Pulsatile Tinnitus: A Narrative Review. JAMA Otolaryngol Head Neck Surg. 2022 05 01; 148(5):476-483.

Khankari J, Yu Y, Ouyang J, Hussein R, Do HM, Heit JJ, Zaharchuk G. Automated detection of arterial landmarks and vascular occlusions in patients with acute stroke receiving digital subtraction angiography using deep learning. J Neurointerv Surg. 2023 Jun; 15(6):521-525.

Calabrese E, Rudie JD, Rauschecker AM, Villanueva-Meyer JE, Clarke JL, Solomon DA, Cha S. Combining radiomics and deep convolutional neural network features from preoperative MRI for predicting clinically relevant genetic biomarkers in glioblastoma. Neurooncol Adv. 2022 Jan-Dec; 4(1):vdac060.

Shiri I, Salimi Y, Pakbin M, Hajianfar G, Avval AH, Sanaat A, Mostafaei S, Akhavanallaf A, Saberi A, Mansouri Z, Askari D, Ghasemian M, Sharifipour E, Sandoughdaran S, Sohrabi A, Sadati E, Livani S, Iranpour P, Kolahi S, Khateri M, Bijari S, Atashzar MR, Shayesteh SP, Khosravi B, Babaei MR, Jenabi E, Hasanian M, Shahhamzeh A, Foroghi Ghomi SY, Mozafari A, Teimouri A, Movaseghi F, Ahmari A, Goharpey N, Bozorgmehr R, Shirzad-Aski H, Mortazavi R, Karimi J, Mortazavi N, Besharat S, Afsharpad M, Abdollahi H, Geramifar P, Radmard AR, Arabi H, Rezaei-Kalantari K, Oveisi M, Rahmim A, Zaidi H. COVID-19 prognostic modeling using CT radiomic features and machine learning algorithms: Analysis of a multi-institutional dataset of 14,339 patients. Comput Biol Med. 2022 06; 145:105467.

Palmer CE, Pecheva D, Iversen JR, Hagler DJ, Sugrue L, Nedelec P, Fan CC, Thompson WK, Jernigan TL, Dale AM. Corrigendum to "Microstructural development from 9 to 14 years: Evidence from the ABCD Study" [Dev. Cognit. Neurosci. 53 (2022) 101044]. Dev Cogn Neurosci. 2022 Apr; 54:101063.

Shiri I, Amini M, Nazari M, Hajianfar G, Haddadi Avval A, Abdollahi H, Oveisi M, Arabi H, Rahmim A, Zaidi H. Impact of feature harmonization on radiogenomics analysis: Prediction of EGFR and KRAS mutations from non-small cell lung cancer PET/CT images. Comput Biol Med. 2022 03; 142:105230.

Romano MF, Kolachalama VB. Deep learning for subtyping the Alzheimer's disease spectrum. Trends Mol Med. 2022 02; 28(2):81-83.

Palmer CE, Pecheva D, Iversen JR, Hagler DJ, Sugrue L, Nedelec P, Fan CC, Thompson WK, Jernigan TL, Dale AM. Microstructural development from 9 to 14 years: Evidence from the ABCD Study. Dev Cogn Neurosci. 2022 02; 53:101044.

Zhao MY, Woodward A, Fan AP, Chen KT, Yu Y, Chen DY, Moseley ME, Zaharchuk G. Reproducibility of cerebrovascular reactivity measurements: A systematic review of neuroimaging techniques. J Cereb Blood Flow Metab. 2022 05; 42(5):700-717.

Rauschecker AM, Gleason TJ, Nedelec P, Duong MT, Weiss DA, Calabrese E, Colby JB, Sugrue LP, Rudie JD, Hess CP. Interinstitutional Portability of a Deep Learning Brain MRI Lesion Segmentation Algorithm. Radiol Artif Intell. 2022 Jan; 4(1):e200152.

Gu W, Rauschecker AM, Hsu E, Zorn KC, Sucu Y, Federman S, Gopez A, Arevalo S, Sample HA, Talevich E, Nguyen ED, Gottschall M, Nourbakhsh B, Gold CA, Cree BAC, Douglas VC, Richie MB, Shah MP, Josephson SA, Gelfand JM, Miller S, Wang L, Tihan T, DeRisi JL, Chiu CY, Wilson MR. Detection of Neoplasms by Metagenomic Next-Generation Sequencing of Cerebrospinal Fluid. JAMA Neurol. 2021 11 01; 78(11):1355-1366.

Zhou P, Wang Y, Sun J, Yu Y, Mossa-Basha M, Zhu C. Assessment of Therapeutic Response to Statin Therapy in Patients With Intracranial or Extracranial Carotid Atherosclerosis by Vessel Wall MRI: A Systematic Review and Updated Meta-Analysis. Front Cardiovasc Med. 2021; 8:742935.

Nillo RM, Broce IJ, Uzgil B, Singhal NS, Glastonbury CM, Hess CP, Barkovich JA, Desikan RS, Sugrue LP. Longitudinal analysis of regional brain changes in anti-NMDAR encephalitis: a case report. BMC Neurol. 2021 Oct 27; 21(1):412.

Scangos KW, Khambhati AN, Daly PM, Makhoul GS, Sugrue LP, Zamanian H, Liu TX, Rao VR, Sellers KK, Dawes HE, Starr PA, Krystal AD, Chang EF. Closed-loop neuromodulation in an individual with treatment-resistant depression. Nat Med. 2021 10; 27(10):1696-1700.

Smith ACW, Jonkman S, Difeliceantonio AG, O'Connor RM, Ghoshal S, Romano MF, Everitt BJ, Kenny PJ. Opposing roles for striatonigral and striatopallidal neurons in dorsolateral striatum in consolidating new instrumental actions. Nat Commun. 2021 08 25; 12(1):5121.

Khodabakhshi Z, Amini M, Mostafaei S, Haddadi Avval A, Nazari M, Oveisi M, Shiri I, Zaidi H. Overall Survival Prediction in Renal Cell Carcinoma Patients Using Computed Tomography Radiomic and Clinical Information. J Digit Imaging. 2021 10; 34(5):1086-1098.